Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus lutea |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus lutea strain LPB0140
Accession NumberNZ_CP018154.1
Gene Summary
Adenine Count
680779 bp
Thymine Count
684031 bp
Guanine Count
586195 bp
Cytosine Count
582036 bp
Genome Length
2533041 bp
Protein-coding Genes
2355 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sapc family protein | LPB140_RS05025 | Not Available | - | 1051458 - 1052237 | 29039.7 |
| fad-binding oxidoreductase | LPB140_RS05030 | Not Available | - | 1052350 - 1053780 | 51456.9 |
| hypothetical protein | LPB140_RS05035 | Not Available | + | 1053964 - 1054485 | 19167.4 |
| dead/deah box helicase | LPB140_RS05040 | Not Available | + | 1054624 - 1055994 | 50911.3 |
| Trna-trp | Not Available | Not Available | + | 1056192 - 1056267 | Not Available |
| tonb-dependent receptor | LPB140_RS05050 | Not Available | - | 1056431 - 1058695 | 82192.9 |
| glutamate--cysteine ligase | LPB140_RS05055 | Not Available | - | 1058907 - 1060295 | 51451.5 |
| duf11 domain-containing protein | LPB140_RS05060 | Not Available | - | 1060385 - 1062436 | 72125.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | LPB140_RS05065 | Not Available | - | 1062583 - 1063356 | 28465.8 |
| 4-hydroxybenzoate octaprenyltransferase | LPB140_RS05070 | Not Available | + | 1063473 - 1064432 | 34966.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.