Planococcus plakortidis strain DSM 23997

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Caryophanaceae

Genus

Planococcus

Description

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyCaryophanaceae
GenusPlanococcus
SpeciesPlanococcus plakortidis
Strainstrain DSM 23997

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planococcus plakortidis strain DSM 23997

NZ_CP016539.2

Gene Summary

Adenine Count

819213 bp

Thymine Count

812466 bp

Guanine Count

817940 bp

Cytosine Count

812199 bp

Genome Length

3261818 bp

Protein-coding Genes

3190 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
imp dehydrogenaseBBI15_RS00055P21879+14408 - 1587152703.1
d-alanyl-d-alanine carboxypeptidase family proteinBBI15_RS00060Q05523+15972 - 1725546790.7
plp-dependent aminotransferase family proteinBBI15_RS00065P96669-17267 - 1869154052.1
pyridoxal 5'-phosphate synthase lyase subunit pdxsBBI15_RS00070Q65PL2+18796 - 1968031668.3
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtBBI15_RS00075Q5L3Y1+19683 - 2028821687.4
serine--trna ligaseBBI15_RS00080B1YGC4+20572 - 2184648650.5
alpha/beta fold hydrolaseBBI15_RS00085O31581+21930 - 2278732372.8
trna adenosine(34) deaminase tadaBBI15_RS00090P21335-22802 - 2329318345.1
deoxynucleoside kinaseBBI15_RS00095P37530+23456 - 2409425077.2
deoxynucleoside kinaseBBI15_RS00100P37529+24091 - 2476526441.4

Displaying genes 11 – 20 of 3292 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

203 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da

Displaying 1–10 of 203 metabolites