Flavonifractor plautii strain YL31

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Flavonifractor

Description

Flavonifractor plautii strain YL31 is a Gram-positive, facultative anaerobic bacterium that is part of the human gut microbiota. This strain is characterized by its capacity to thrive in varying oxygen conditions, which enables it to adapt to the dynamic environment of the gastrointestinal tract. F. plautii is known to contribute to the complex microbial community within the gut, where it may play a role in the fermentation of dietary fibers, thereby influencing gut health and metabolism. The presence of Flavonifractor plautii in the human gut suggests its potential involvement in various microbial interactions, which can affect nutrient absorption and overall digestive health. Its ability to grow in both aerobic and anaerobic conditions allows it to exploit different niches within the gut ecosystem, potentially impacting the balance of microbial populations and metabolic activities. This adaptability may provide insights into its role in maintaining gut homeostasis or its contribution to metabolic processes such as short-chain fatty acid production, which is essential for colonic health. Understanding the specific functions and interactions of strain YL31 within the gut microbiota could offer valuable perspectives on its significance in human health and disease management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusFlavonifractor
SpeciesFlavonifractor plautii
Strainstrain YL31

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiota
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavonifractor plautii strain YL31


Gene Summary

Adenine Count

746842 bp

Thymine Count

745973 bp

Guanine Count

1166796 bp

Cytosine Count

1158867 bp

Genome Length

3818478 bp

Protein-coding Genes

3605 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative transglycosylaseA4U99_RS03750Not Available-784546 - 78528625143.8
AttlNot AvailableNot Available+785400 - 785417Not Available
Tyrosine-type recombinase/integraseA4U99_RS03755Not Available-785520 - 78654838137.8
hypothetical proteinA4U99_RS03760Not Available-786561 - 7868128634.49
Repressor proteinA4U99_RS19830Not Available-786930 - 78721410593.0
Rep proteinA4U99_RS03770Not Available-787230 - 7874578464.24
Gp9, cpp15A4U99_RS03775Not Available-787856 - 78855126246.6
txe/yoeb family addiction module toxinA4U99_RS03780Not Available-788797 - 78905710450.4
type ii toxin-antitoxin system relb/dinj family antitoxinA4U99_RS03785Not Available-789050 - 7893079611.45
imma/irre family metallo-endopeptidaseA4U99_RS03790Not Available+789476 - 79011424031.7

Displaying genes 1 – 10 of 3760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

267 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 267 metabolites