Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-ii family nitrogen regulator | I596_RS00360 | P11671 | - | 95924 - 96262 | 12317.1 |
| ubiquinone biosynthesis accessory factor ubik | I596_RS00365 | Q8ZLY9 | + | 96630 - 96902 | 9965.14 |
| yifb family mg chelatase-like aaa atpase | I596_RS00370 | P45049 | + | 97070 - 98572 | 53413.3 |
| putative peptide maturation dehydrogenase | I596_RS00375 | Not Available | - | 98618 - 99778 | 42613.9 |
| nhlp-related ripp peptide | I596_RS00380 | Not Available | + | 99946 - 100227 | 10032.4 |
| putative peptide modification system cyclase | I596_RS00385 | Not Available | - | 100288 - 102957 | 98289.4 |
| ggdef domain-containing protein | I596_RS00390 | Q9HT84 | - | 103161 - 104231 | 38593.9 |
| isocitrate lyase | I596_RS00395 | Q9K9H0 | - | 104418 - 105722 | 47298.7 |
| malate synthase a | I596_RS00400 | P95329 | - | 105864 - 107462 | 58431.1 |
| lysr family transcriptional regulator | I596_RS00405 | P25544 | + | 107582 - 108598 | 37764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
