Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dokdonella koreensis DS-123
Accession NumberNZ_CP015249.1
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4398 domain-containing protein | I596_RS00310 | Not Available | + | 83810 - 84196 | 13836.5 |
| ompa family protein | I596_RS00315 | P65594 | + | 84193 - 85185 | 35051.2 |
| ydch family protein | I596_RS00320 | Not Available | + | 85666 - 85893 | 8891.52 |
| pyridoxal-phosphate dependent enzyme | I596_RS00325 | P46794 | + | 85999 - 87369 | 50057.4 |
| class i sam-dependent methyltransferase | I596_RS00330 | Not Available | + | 87549 - 88562 | 37877.5 |
| response regulator transcription factor | I596_RS00335 | Not Available | - | 88765 - 89445 | 24148.2 |
| acetate--coa ligase | I596_RS00340 | Q4UP35 | - | 89575 - 91515 | 71452.8 |
| dcap family trimeric outer membrane transporter | I596_RS00345 | Not Available | + | 91692 - 93056 | 47820.2 |
| mfs transporter | I596_RS00350 | A4QH18 | + | 93076 - 94740 | 59506.3 |
| aldo/keto reductase | I596_RS00355 | Q40648 | - | 94873 - 95883 | 37634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.