Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Rhodanobacteraceae
Genus
Dokdonella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Rhodanobacteraceae |
| Genus | Dokdonella |
| Species | Dokdonella koreensis |
| Strain | DS-123 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
659180 bp
Thymine Count
659388 bp
Guanine Count
1564911 bp
Cytosine Count
1563140 bp
Genome Length
4446619 bp
Protein-coding Genes
3590 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4126 domain-containing protein | I596_RS00410 | Not Available | - | 108555 - 109184 | 22016.9 |
| hypothetical protein | I596_RS18875 | Not Available | + | 109339 - 109620 | 9650.93 |
| glsb/yeaq/ymge family stress response membrane protein | I596_RS00420 | Not Available | + | 109684 - 109983 | 9990.87 |
| ggdef domain-containing protein | I596_RS00425 | P75908 | + | 110194 - 111105 | 33842.4 |
| ybay family lipoprotein | I596_RS00430 | Not Available | + | 111413 - 112243 | 29192.9 |
| dead/deah box helicase | I596_RS00435 | P30015 | - | 112366 - 116739 | 158378.0 |
| helix-turn-helix domain-containing protein | I596_RS00440 | P0ACN2 | - | 116848 - 117231 | 14221.4 |
| sdr family oxidoreductase | I596_RS00445 | B8NHD7 | + | 117381 - 118235 | 29689.1 |
| vit family protein | I596_RS00450 | Q9P6J2 | - | 118243 - 118932 | 22640.3 |
| serine/threonine-protein kinase | I596_RS00455 | Not Available | - | 118983 - 121889 | 103333.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
