Vibrio fluvialis strain ATCC 33809

Gram-negativeMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio fluvialis strain ATCC 33809 is a Gram-negative bacterium that thrives in diverse aquatic environments, including coastal, estuarine, fresh, and marine habitats. This strain exhibits aerobic metabolism, indicating that it requires oxygen for growth and survival. Vibrio fluvialis is characterized by its rod-shaped morphology, typical of the Vibrio genus, which is known for its distinctive curved shape. The species is part of a larger group of bacteria commonly associated with marine ecosystems, where it plays a role in the microbial community dynamics. Given its preference for aerobic conditions, V. fluvialis is likely to be found in surface waters and regions with adequate oxygen levels, potentially influencing nutrient cycling and organic matter decomposition in these environments. The ecological adaptability of V. fluvialis strain ATCC 33809 to various aquatic habitats suggests its potential involvement in the interactions between microbial communities and their environments. Its presence in estuarine and freshwater systems may also highlight its role in the transition zones between saline and freshwater ecosystems, where it could contribute to the overall microbial diversity and functional processes in these critical environments. Further studies may elucidate its specific interactions within these complex ecological networks.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio fluvialis
Strainstrain ATCC 33809

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio fluvialis strain ATCC 33809
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcoastal environments; estuarine environments; Fresh water; Marine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal; Human

Genome Summary

Vibrio fluvialis strain ATCC 33809


Gene Summary

Adenine Count

420436 bp

Thymine Count

420326 bp

Guanine Count

413619 bp

Cytosine Count

417514 bp

Genome Length

1671895 bp

Protein-coding Genes

1544 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aldehyde dehydrogenase family proteinAL536_RS05575Not Available+2441 - 313924916.4
sodium/proline symporter putpAL536_RS06015Not Available+3212 - 470253346.8
hypothetical proteinAL536_RS06175Not Available+4917 - 51448739.54
methyl-accepting chemotaxis proteinAL536_RS10365Not Available+5343 - 723268204.3
lrp/asnc family transcriptional regulatorAL536_RS10615Not Available+7380 - 785618135.0
coniferyl aldehyde dehydrogenaseAL536_RS14520Not Available+7870 - 930052316.8
3,4-dihydroxy-2-butanone-4-phosphate synthaseAL536_RS14560Not Available+9680 - 1033623789.9
dead/deah box helicaseAL536_RS16075Not Available+10548 - 1174144143.6
mfs transporterAL536_RS16080Not Available-11830 - 1303242719.3
lysr substrate-binding domain-containing proteinAL536_RS16845Not Available+13314 - 1428236452.6

Displaying genes 1 – 10 of 1544 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

313 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 313 metabolites