Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas fragi |
| Strain | strain P121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cutting and processing laboratories; leaves of cold-adapted plants; meat; milk; processing facilities |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1055364 bp
Thymine Count
1055101 bp
Guanine Count
1494902 bp
Cytosine Count
1496442 bp
Genome Length
5101809 bp
Protein-coding Genes
4473 genes
Non-Coding Genes
178 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | AV641_RS23005 | Not Available | - | 1192897 - 1193838 | 35210.7 |
| Putative terminase atpase subunit | AV641_RS23750 | Not Available | - | 1193957 - 1195726 | 67783.9 |
| Gpo family capsid scaffolding protein | AV641_RS05560 | Not Available | + | 1195890 - 1196816 | 33384.4 |
| Major capsid protein | AV641_RS05565 | Not Available | + | 1196818 - 1197837 | 37291.8 |
| Putative terminase endonuclease subunit | AV641_RS05570 | Not Available | + | 1197834 - 1198550 | 26822.1 |
| Putative head completion/stabilization protein | AV641_RS05575 | Not Available | + | 1198649 - 1199110 | 17010.3 |
| Putative tail protein | AV641_RS05580 | Not Available | + | 1199107 - 1199556 | 16853.0 |
| Virion morphogenesis family protein | AV641_RS05585 | Not Available | + | 1199546 - 1200226 | 25432.8 |
| Putative tail sheath protein | AV641_RS05590 | Not Available | + | 1200238 - 1201353 | 39507.5 |
| Putative tail tube protein | AV641_RS05595 | Not Available | + | 1201360 - 1201809 | 15987.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
