Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | M1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079394 bp
Thymine Count
1079406 bp
Guanine Count
1725534 bp
Cytosine Count
1726927 bp
Genome Length
5611261 bp
Protein-coding Genes
4811 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysis system i-spanin subunit rz | HRUBRI_RS07135 | Not Available | - | 1662759 - 1663328 | 19898.3 |
| Lysozyme | HRUBRI_RS07140 | P03706 | - | 1663325 - 1663855 | 19705.6 |
| hypothetical protein | HRUBRI_RS07145 | Not Available | - | 1663852 - 1664226 | 13142.3 |
| Tail protein | HRUBRI_RS07150 | Not Available | - | 1664267 - 1664476 | 7090.42 |
| Putative head completion protein | HRUBRI_RS07155 | Not Available | - | 1664476 - 1664967 | 18328.6 |
| Putative small terminase subunit | HRUBRI_RS07160 | P25476 | - | 1665056 - 1665775 | 26269.5 |
| Capsid protein | HRUBRI_RS07165 | P25477 | - | 1665775 - 1666818 | 38188.2 |
| Gpo family capsid scaffolding protein | HRUBRI_RS07170 | P25478 | - | 1666870 - 1667712 | 30243.5 |
| Gp4, phage terminase, atpase subunit | HRUBRI_RS07175 | P25479 | + | 1667856 - 1669637 | 67700.1 |
| Gp5, phage portal protein, pbsx family | HRUBRI_RS07180 | P25480 | + | 1669637 - 1670689 | 38845.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
