Burkholderia pyrrocinia strain DSM 10685

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia pyrrocinia
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatpetrol contaminated soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia pyrrocinia strain DSM 10685


Gene Summary

Adenine Count

596688 bp

Thymine Count

593996 bp

Guanine Count

1198737 bp

Cytosine Count

1194682 bp

Genome Length

3584103 bp

Protein-coding Genes

3250 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
arsenate reductaseABD05_RS00005Q39F41+19 - 248490129.8
arsenate reductaseABD05_RS38795Not Available+2469 - 445374343.9
peptide deformylaseABD05_RS00020Not Available-4560 - 509319843.9
nad-dependent dna ligase ligaABD05_RS00025Not Available-5090 - 716575247.5
cell division protein zipa c-terminal ftsz-binding domain-containing proteinABD05_RS00030Not Available-7332 - 859745184.9
chromosome segregation protein smcABD05_RS00035Not Available-8683 - 12195129379.0
dmt family transporterABD05_RS00040Not Available-12335 - 1327632719.8
succinyldiaminopimelate transaminaseABD05_RS00045Q3S8P9+13436 - 1466844655.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseABD05_RS00050Not Available+14713 - 1554029539.3
arsc family reductaseABD05_RS00055Not Available+15540 - 1590813376.3

Displaying genes 1 – 10 of 7183 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

212 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 212 metabolites