Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Sedimenticolaceae
Genus
Sedimenticola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Sedimenticolaceae |
| Genus | Sedimenticola |
| Species | Sedimenticola thiotaurini |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sedimenticola thiotaurini strain SIP-G1
Accession NumberNZ_CP011412.1
Gene Summary
Adenine Count
832622 bp
Thymine Count
831553 bp
Guanine Count
1130158 bp
Cytosine Count
1134611 bp
Genome Length
3928944 bp
Protein-coding Genes
3596 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel-dependent hydrogenase large subunit | AAY24_RS00210 | P31878 | + | 42851 - 44035 | 43396.5 |
| hydrogenase maturation nickel metallochaperone hypa | AAY24_RS00215 | Q43948 | + | 44151 - 44483 | 12162.7 |
| hydrogenase nickel incorporation protein hypb | AAY24_RS00220 | P31880 | + | 44483 - 45439 | 35414.2 |
| hypc/hybg/hupf family hydrogenase formation chaperone | AAY24_RS00225 | P28157 | + | 45590 - 45823 | 8118.89 |
| hydrogenase formation protein hypd | AAY24_RS00230 | P31904 | + | 45820 - 46953 | 41628.4 |
| hydrogenase expression/formation protein hype | AAY24_RS00235 | P40595 | + | 47077 - 48120 | 36667.2 |
| hydrogenase maturation protein | AAY24_RS00240 | P31907 | + | 48133 - 49839 | 63737.5 |
| sigma-54 dependent transcriptional regulator | AAY24_RS00245 | P29267 | + | 49836 - 51332 | 56149.2 |
| atp-binding protein | AAY24_RS00250 | Q9HWA7 | + | 51473 - 52828 | 49764.6 |
| hupu protein | AAY24_RS00255 | P13063 | + | 52968 - 53999 | 36797.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.