Flavisolibacter tropicus strain LCS9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Flavisolibacter

Description

Flavisolibacter tropicus strain LCS9 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This strain exemplifies typical characteristics of the genus Flavisolibacter, which is known for its adaptability to various environmental conditions. As a Gram-negative organism, LCS9 possesses a distinctive cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may influence its interactions with other microorganisms and its resilience to certain environmental stresses. The rod shape of Flavisolibacter tropicus strain LCS9 contributes to its motility and surface attachment capabilities, potentially facilitating its survival in diverse habitats. The specific temperature preference suggests that this bacterium may play a role in the microbiomes of temperate environments, where such conditions are prevalent. While the ecological roles of Flavisolibacter tropicus strain LCS9 remain to be fully elucidated, its optimal growth at 25.0°C may indicate a potential involvement in nutrient cycling processes in soils or aquatic systems, where similar temperatures are common. This insight highlights the importance of studying such microorganisms, as they could contribute to ecosystem functioning and stability in temperate climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusFlavisolibacter
SpeciesFlavisolibacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavisolibacter tropicus strain LCS9

Accession NumberNZ_CP011390.1

Gene Summary

Adenine Count

1739923 bp

Thymine Count

1734879 bp

Guanine Count

1229287 bp

Cytosine Count

1236774 bp

Genome Length

5940863 bp

Protein-coding Genes

4916 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSY85_RS00005Not Available+124 - 45912055.4
hypothetical proteinSY85_RS25545Not Available+563 - 7396272.45
hypothetical proteinSY85_RS00010Not Available+718 - 120317195.3
hypothetical proteinSY85_RS25550Not Available-1313 - 184019409.6
hypothetical proteinSY85_RS25555Not Available-1774 - 207311124.7
hypothetical proteinSY85_RS25380Not Available+2179 - 24369066.88
hypothetical proteinSY85_RS00020Not Available+3021 - 32939641.47
hypothetical proteinSY85_RS25385Not Available+3318 - 382117697.9
hypothetical proteinSY85_RS00030Not Available+3779 - 590876094.7
hypothetical proteinSY85_RS25560Not Available+5887 - 60636196.37

Displaying genes 1 – 10 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

191 records
Metabolite IDMetabolite nameStructureCAS number
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008135-dehydro-D-fructoseC6H10O6Chemical structure of 5-dehydro-D-fructoseNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001140cyclohexyl isocyanideC7H11NChemical structure of cyclohexyl isocyanideNot available
Average109.1689Da
Monoisotopic109.089149357Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 11–20 of 191 metabolites