Flavisolibacter tropicus strain LCS9

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Flavisolibacter

Description

Flavisolibacter tropicus strain LCS9 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. This strain exemplifies typical characteristics of the genus Flavisolibacter, which is known for its adaptability to various environmental conditions. As a Gram-negative organism, LCS9 possesses a distinctive cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may influence its interactions with other microorganisms and its resilience to certain environmental stresses. The rod shape of Flavisolibacter tropicus strain LCS9 contributes to its motility and surface attachment capabilities, potentially facilitating its survival in diverse habitats. The specific temperature preference suggests that this bacterium may play a role in the microbiomes of temperate environments, where such conditions are prevalent. While the ecological roles of Flavisolibacter tropicus strain LCS9 remain to be fully elucidated, its optimal growth at 25.0°C may indicate a potential involvement in nutrient cycling processes in soils or aquatic systems, where similar temperatures are common. This insight highlights the importance of studying such microorganisms, as they could contribute to ecosystem functioning and stability in temperate climates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusFlavisolibacter
SpeciesFlavisolibacter tropicus
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavisolibacter tropicus strain LCS9

Accession NumberNZ_CP011390.1

Gene Summary

Adenine Count

1739923 bp

Thymine Count

1734879 bp

Guanine Count

1229287 bp

Cytosine Count

1236774 bp

Genome Length

5940863 bp

Protein-coding Genes

4916 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSY85_RS00005Not Available+124 - 45912055.4
hypothetical proteinSY85_RS25545Not Available+563 - 7396272.45
hypothetical proteinSY85_RS00010Not Available+718 - 120317195.3
hypothetical proteinSY85_RS25550Not Available-1313 - 184019409.6
hypothetical proteinSY85_RS25555Not Available-1774 - 207311124.7
hypothetical proteinSY85_RS25380Not Available+2179 - 24369066.88
hypothetical proteinSY85_RS00020Not Available+3021 - 32939641.47
hypothetical proteinSY85_RS25385Not Available+3318 - 382117697.9
hypothetical proteinSY85_RS00030Not Available+3779 - 590876094.7
hypothetical proteinSY85_RS25560Not Available+5887 - 60636196.37

Displaying genes 1 – 10 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

191 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 191 metabolites