Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | LC55x_RS00100 | Not Available | + | 24892 - 25794 | 33808.8 |
| glxa family transcriptional regulator | LC55x_RS00105 | Not Available | - | 26160 - 27116 | 34767.6 |
| lysozyme inhibitor lpri family protein | LC55x_RS00110 | Not Available | + | 27571 - 28410 | 30879.4 |
| hypothetical protein | LC55x_RS27585 | Not Available | + | 28492 - 29019 | 19603.2 |
| lysozyme inhibitor lpri family protein | LC55x_RS00120 | Not Available | + | 29064 - 29768 | 25217.7 |
| m4 family metallopeptidase | LC55x_RS00130 | Not Available | - | 30709 - 32604 | 66775.9 |
| hypothetical protein | LC55x_RS00135 | Not Available | - | 33314 - 33535 | 8052.64 |
| hypothetical protein | LC55x_RS27590 | Not Available | - | 33970 - 34140 | 6218.55 |
| slc13 family permease | LC55x_RS00140 | Not Available | - | 34378 - 36177 | 63938.2 |
| pas domain s-box protein | LC55x_RS00145 | Not Available | + | 36279 - 37502 | 44907.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
