Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Minor structural protein | LC55x_RS23855 | Not Available | + | 5904765 - 5905205 | 15237.2 |
| chromosomal replication initiator protein dnaa | LC55x_RS00005 | Not Available | + | 1 - 1335 | 50347.5 |
| dna polymerase iii subunit beta | LC55x_RS00010 | Not Available | + | 2213 - 3313 | 40958.2 |
| dna replication/repair protein recf | LC55x_RS00015 | Not Available | + | 3850 - 4935 | 40279.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | LC55x_RS00020 | Not Available | + | 5456 - 7939 | 91314.9 |
| cpbp family intramembrane glutamic endopeptidase | LC55x_RS00025 | Not Available | + | 8112 - 8783 | 23869.3 |
| m48 family metallopeptidase | LC55x_RS00030 | Not Available | + | 8893 - 9696 | 28242.6 |
| lipopolysaccharide assembly protein lapb | LC55x_RS00035 | Not Available | + | 9834 - 11057 | 44474.5 |
| energy transducer tonb | LC55x_RS00040 | Not Available | + | 11204 - 11881 | 24105.7 |
| mota/tolq/exbb proton channel family protein | LC55x_RS00045 | Not Available | + | 11965 - 12714 | 27217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
