Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LC55x_RS02360 | Not Available | + | 597598 - 599121 | 54972.8 |
| alpha-amylase family glycosyl hydrolase | LC55x_RS02365 | Not Available | + | 599118 - 600803 | 62676.7 |
| laci family dna-binding transcriptional regulator | LC55x_RS02370 | Not Available | - | 600946 - 601977 | 37178.5 |
| abc transporter permease subunit | LC55x_RS02375 | Not Available | - | 602080 - 602985 | 32046.0 |
| vit family protein | LC55x_RS02380 | Not Available | - | 603000 - 603710 | 24047.8 |
| peptide abc transporter substrate-binding protein | LC55x_RS02385 | Not Available | - | 603721 - 605346 | 59688.2 |
| glutamate--cysteine ligase | LC55x_RS02390 | Not Available | + | 605614 - 606960 | 50540.2 |
| cysteine hydrolase family protein | LC55x_RS02395 | Not Available | - | 607143 - 607733 | 20944.0 |
| dmt family transporter | LC55x_RS02400 | Not Available | - | 607730 - 608614 | 31145.8 |
| lysr family transcriptional regulator | LC55x_RS02405 | Not Available | + | 608753 - 609676 | 33673.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
