Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 499842 - 499917 | Not Available |
| Trna-ile | Not Available | Not Available | + | 499937 - 500013 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 500274 - 503139 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 503311 - 503425 | Not Available |
| glycosyl hydrolase family 28-related protein | LC55x_RS26590 | Not Available | + | 504201 - 505844 | 58099.1 |
| hypothetical protein | LC55x_RS01990 | Not Available | + | 505963 - 506211 | 9350.85 |
| hamp domain-containing sensor histidine kinase | LC55x_RS01995 | Not Available | - | 506767 - 508083 | 48946.1 |
| response regulator transcription factor | LC55x_RS02000 | Not Available | - | 508080 - 508766 | 25812.5 |
| type 1 glutamine amidotransferase domain-containing protein | LC55x_RS02005 | Not Available | - | 508773 - 509888 | 40176.3 |
| 2og-fe dioxygenase family protein | LC55x_RS02010 | Not Available | - | 509980 - 510714 | 27275.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
