Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS01915 | Not Available | - | 488112 - 488789 | 24113.6 |
| orotate phosphoribosyltransferase | LC55x_RS01920 | Not Available | - | 488936 - 489592 | 23023.5 |
| gnat family n-acetyltransferase | LC55x_RS01925 | Not Available | - | 489589 - 490152 | 20151.3 |
| exodeoxyribonuclease iii | LC55x_RS01930 | Not Available | + | 490209 - 490982 | 29405.4 |
| ampg family muropeptide mfs transporter | LC55x_RS01935 | Not Available | + | 491065 - 492411 | 47508.0 |
| hypothetical protein | LC55x_RS01940 | Not Available | + | 492528 - 492869 | 12395.7 |
| anhydro-n-acetylmuramic acid kinase | LC55x_RS01945 | Not Available | - | 492989 - 494167 | 40954.5 |
| m23 family metallopeptidase | LC55x_RS01950 | Not Available | - | 494457 - 495938 | 53737.8 |
| tyrosine--trna ligase | LC55x_RS01955 | Not Available | + | 496143 - 497357 | 44366.7 |
| 16s ribosomal rna | Not Available | Not Available | + | 498192 - 499736 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
