Lysobacter capsici strain 55

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter capsici strain 55 is a rod-shaped bacterium that thrives in chromium-contaminated environments, including both water sources and plant-associated habitats. This strain has been isolated from chromium-contaminated water and specifically from the water of plants, such as ready-to-eat lettuce, suggesting its potential association with agricultural systems impacted by chromium pollution. The presence of Lysobacter capsici strain 55 in such habitats indicates its possible role in the microbial community dynamics of contaminated ecosystems. The adaptability of this strain to chromium-laden environments may provide insights into bioremediation strategies, as it could contribute to the degradation or transformation of chromium compounds in affected areas. Understanding the mechanisms by which Lysobacter capsici strain 55 interacts with its chromium-rich habitat may also help elucidate its ecological role in mitigating the toxic effects of this heavy metal on plants and other microorganisms. Future research on this strain could further uncover its potential applications in bioremediation and the sustainable management of contaminated water sources in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter capsici
Strainstrain 55

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter capsici strain 55
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter capsici strain 55


Gene Summary

Adenine Count

1065478 bp

Thymine Count

1068386 bp

Guanine Count

2130390 bp

Cytosine Count

2127635 bp

Genome Length

6391889 bp

Protein-coding Genes

5219 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tyrosine-type recombinase/integraseLC55x_RS01815Not Available-463430 - 46465946301.8
methyltransferaseLC55x_RS01820Not Available-464935 - 46589733139.3
ubiquinone biosynthesis accessory factor ubikLC55x_RS01825Not Available-465908 - 46617410132.1
p-ii family nitrogen regulatorLC55x_RS01830Not Available+466505 - 46684312179.9
lysr family transcriptional regulatorLC55x_RS01835Not Available-466955 - 46785132786.6
yeih family proteinLC55x_RS01840Not Available+468030 - 46902233607.2
m12 family metallo-peptidaseLC55x_RS01845Not Available+469509 - 47078944849.6
polyamine aminopropyltransferaseLC55x_RS01850Not Available-471013 - 47186731768.8
arginine decarboxylaseLC55x_RS01855Not Available+472149 - 47403869298.3
ycii family proteinLC55x_RS01860Not Available+474056 - 4743079310.04

Displaying genes 411 – 420 of 5308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites