Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | LC55x_RS01815 | Not Available | - | 463430 - 464659 | 46301.8 |
| methyltransferase | LC55x_RS01820 | Not Available | - | 464935 - 465897 | 33139.3 |
| ubiquinone biosynthesis accessory factor ubik | LC55x_RS01825 | Not Available | - | 465908 - 466174 | 10132.1 |
| p-ii family nitrogen regulator | LC55x_RS01830 | Not Available | + | 466505 - 466843 | 12179.9 |
| lysr family transcriptional regulator | LC55x_RS01835 | Not Available | - | 466955 - 467851 | 32786.6 |
| yeih family protein | LC55x_RS01840 | Not Available | + | 468030 - 469022 | 33607.2 |
| m12 family metallo-peptidase | LC55x_RS01845 | Not Available | + | 469509 - 470789 | 44849.6 |
| polyamine aminopropyltransferase | LC55x_RS01850 | Not Available | - | 471013 - 471867 | 31768.8 |
| arginine decarboxylase | LC55x_RS01855 | Not Available | + | 472149 - 474038 | 69298.3 |
| ycii family protein | LC55x_RS01860 | Not Available | + | 474056 - 474307 | 9310.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
