Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | LC55x_RS01780 | Not Available | + | 455596 - 456219 | 23619.8 |
| flavodoxin | LC55x_RS28180 | Not Available | - | 456301 - 456618 | 11886.1 |
| methyltransferase | LC55x_RS01785 | Not Available | - | 456913 - 457248 | 11879.2 |
| hypothetical protein | LC55x_RS01790 | Not Available | - | 457370 - 457657 | 10450.7 |
| hypothetical protein | LC55x_RS01795 | Not Available | - | 457894 - 458760 | 32487.1 |
| helix-turn-helix domain-containing protein | LC55x_RS01800 | Not Available | + | 458887 - 459186 | 11038.5 |
| hypothetical protein | LC55x_RS01805 | Not Available | + | 459489 - 460646 | 42883.6 |
| giy-yig nuclease family protein | LC55x_RS25905 | Not Available | - | 460657 - 461220 | 21127.1 |
| hypothetical protein | LC55x_RS01810 | Not Available | - | 461224 - 463056 | 69332.0 |
| helix-turn-helix transcriptional regulator | LC55x_RS25910 | Not Available | - | 463053 - 463433 | 14208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
