Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shedu immune nuclease family protein | LC55x_RS01730 | Not Available | + | 443508 - 444686 | 44830.1 |
| cyclophilin-like fold protein | LC55x_RS28175 | Not Available | - | 444823 - 445347 | 18611.0 |
| mfs transporter | LC55x_RS01740 | Not Available | - | 445344 - 446552 | 41230.4 |
| alpha/beta hydrolase | LC55x_RS01745 | Not Available | - | 446555 - 447610 | 38394.8 |
| lysr family transcriptional regulator | LC55x_RS01750 | Not Available | + | 447746 - 448633 | 32971.8 |
| type ii toxin-antitoxin system mqsa family antitoxin | LC55x_RS25895 | Not Available | + | 448798 - 449106 | 11222.6 |
| hypothetical protein | LC55x_RS01760 | Not Available | - | 449089 - 451728 | 98512.5 |
| hypothetical protein | LC55x_RS28050 | Not Available | - | 451718 - 452629 | 33573.1 |
| hypothetical protein | LC55x_RS01765 | Not Available | - | 453099 - 453899 | 29292.6 |
| hypothetical protein | LC55x_RS01775 | Not Available | - | 454752 - 455423 | 24773.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
