Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 8-oxoguanine dna glycosylase | LC55x_RS01680 | Not Available | + | 431991 - 432773 | 29010.2 |
| pfkb family carbohydrate kinase | LC55x_RS01685 | Not Available | - | 433368 - 434591 | 43963.4 |
| hypothetical protein | LC55x_RS27630 | Not Available | - | 434588 - 434731 | 4961.07 |
| duf3800 domain-containing protein | LC55x_RS01695 | Not Available | - | 435885 - 436595 | 25614.4 |
| hypothetical protein | LC55x_RS01700 | Not Available | - | 436980 - 437357 | 13966.8 |
| restriction endonuclease | LC55x_RS01705 | Not Available | + | 437438 - 438364 | 34571.0 |
| ig-like domain-containing protein | LC55x_RS27635 | Not Available | - | 438395 - 438829 | 15838.9 |
| hypothetical protein | LC55x_RS27640 | Not Available | - | 438811 - 439002 | 6578.59 |
| uvrd-helicase domain-containing protein | LC55x_RS01720 | Not Available | - | 439424 - 441085 | 62173.5 |
| aaa family atpase | LC55x_RS01725 | Not Available | - | 441082 - 443040 | 72737.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
