Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LC55x_RS01585 | Not Available | + | 403744 - 404190 | 16804.8 |
| gntr family transcriptional regulator | LC55x_RS01590 | Not Available | - | 404450 - 405154 | 25964.1 |
| collagenase | LC55x_RS01595 | Not Available | + | 405898 - 408555 | 95391.9 |
| lysr family transcriptional regulator | LC55x_RS01600 | Not Available | - | 408865 - 409818 | 35043.6 |
| malate synthase a | LC55x_RS01605 | Not Available | + | 409968 - 411605 | 60358.6 |
| isocitrate lyase | LC55x_RS01610 | Not Available | + | 411761 - 413062 | 47179.8 |
| s9 family peptidase | LC55x_RS01615 | Not Available | - | 414309 - 416357 | 74197.6 |
| ggdef domain-containing protein | LC55x_RS01620 | Not Available | + | 416755 - 417723 | 35988.3 |
| putative peptide modification system cyclase | LC55x_RS01625 | Not Available | + | 417747 - 420374 | 95739.8 |
| nhlp-related ripp peptide | LC55x_RS01630 | Not Available | - | 420326 - 420646 | 11549.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
