Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 127 protein | LC55x_RS01490 | Not Available | - | 375507 - 377408 | 69413.9 |
| formylglycine-generating enzyme family protein | LC55x_RS01495 | Not Available | - | 377405 - 379597 | 83760.7 |
| ribokinase | LC55x_RS01500 | Not Available | - | 379641 - 380543 | 30327.3 |
| serine hydrolase | LC55x_RS01505 | Not Available | - | 380540 - 382126 | 56754.4 |
| tonb-dependent receptor | LC55x_RS01510 | Not Available | - | 382209 - 384479 | 82675.8 |
| lysr family transcriptional regulator | LC55x_RS01515 | Not Available | - | 385058 - 385939 | 32347.3 |
| sodium:solute symporter | LC55x_RS01520 | Not Available | - | 386304 - 388895 | 91919.6 |
| coa ester lyase | LC55x_RS01525 | Not Available | - | 388984 - 389838 | 29819.8 |
| alpha/beta fold hydrolase | LC55x_RS01530 | Not Available | + | 390099 - 391001 | 33349.9 |
| olefin beta-lactone synthetase | LC55x_RS01535 | Not Available | + | 391009 - 392706 | 60885.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
