Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3526 domain-containing protein | LC55x_RS01390 | Not Available | + | 345937 - 347340 | 50481.3 |
| duf3526 domain-containing protein | LC55x_RS01395 | Not Available | + | 347337 - 348872 | 55979.1 |
| tonb-dependent receptor domain-containing protein | LC55x_RS01400 | Not Available | + | 348876 - 350813 | 70878.3 |
| hypothetical protein | LC55x_RS01405 | Not Available | + | 350840 - 351832 | 36081.1 |
| pyridoxal-phosphate dependent enzyme | LC55x_RS01410 | Not Available | + | 351832 - 352893 | 38284.3 |
| atp-grasp domain-containing protein | LC55x_RS01415 | Not Available | + | 352918 - 354186 | 46131.1 |
| rossmann-like domain-containing protein | LC55x_RS01420 | Not Available | + | 354485 - 355345 | 30737.8 |
| mfs transporter | LC55x_RS01425 | Not Available | + | 355370 - 356590 | 42952.7 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | LC55x_RS01430 | Not Available | - | 356696 - 357175 | 17618.1 |
| pitrilysin family protein | LC55x_RS01435 | Not Available | + | 357344 - 360208 | 102656.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
