Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | LC55x_RS01185 | Not Available | + | 287843 - 288445 | 21731.8 |
| isoaspartyl peptidase/l-asparaginase family protein | LC55x_RS01190 | Not Available | - | 288569 - 289594 | 35120.5 |
| cyanophycinase | LC55x_RS01195 | Not Available | - | 289671 - 290762 | 39121.8 |
| rna polymerase sigma factor | LC55x_RS01200 | Not Available | + | 290924 - 291502 | 22202.5 |
| fecr family protein | LC55x_RS01205 | Not Available | + | 291480 - 292637 | 41349.6 |
| tonb-dependent receptor | LC55x_RS01210 | Not Available | + | 292762 - 295821 | 112271.0 |
| trans-aconitate 2-methyltransferase | LC55x_RS01215 | Not Available | - | 295979 - 296746 | 28614.6 |
| vcbs repeat-containing protein | LC55x_RS01220 | Not Available | + | 296995 - 299163 | 76948.1 |
| nad(p)-dependent oxidoreductase | LC55x_RS01225 | Not Available | + | 299272 - 300150 | 30264.0 |
| mmcq/yjbr family dna-binding protein | LC55x_RS01230 | Not Available | - | 300157 - 300570 | 15064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
