Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | LC55x_RS01095 | Not Available | + | 264586 - 265857 | 46665.2 |
| mgtc/sapb family protein | LC55x_RS01100 | Not Available | - | 266401 - 267117 | 25265.6 |
| aaa-associated domain-containing protein | LC55x_RS01105 | Not Available | - | 267165 - 268493 | 48257.2 |
| abc transporter permease subunit | LC55x_RS01110 | Not Available | - | 268565 - 270316 | 64507.2 |
| hypothetical protein | LC55x_RS27615 | Not Available | - | 270234 - 270686 | 16399.6 |
| hypothetical protein | LC55x_RS01120 | Not Available | + | 271181 - 271570 | 13163.4 |
| tetr/acrr family transcriptional regulator | LC55x_RS01125 | Not Available | - | 271601 - 272191 | 21723.1 |
| hypothetical protein | LC55x_RS01130 | Not Available | + | 272335 - 273366 | 36551.6 |
| efflux rnd transporter permease subunit | LC55x_RS01135 | Not Available | + | 273476 - 276673 | 113616.0 |
| hypothetical protein | LC55x_RS01140 | Not Available | + | 277924 - 278412 | 17771.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
