Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system export apparatus subunit sctu | LC55x_RS00940 | Not Available | + | 233128 - 234228 | 41004.3 |
| type iii secretion system export apparatus subunit sctt | LC55x_RS00945 | Not Available | - | 234537 - 235322 | 28547.0 |
| type iii secretion system export apparatus subunit scts | LC55x_RS00950 | Not Available | - | 235357 - 235623 | 9568.02 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | LC55x_RS28545 | Not Available | - | 235745 - 236671 | 31405.9 |
| type iii secretion system cytoplasmic ring protein sctq | LC55x_RS00965 | Not Available | - | 236675 - 237775 | 39912.0 |
| response regulator transcription factor | LC55x_RS28550 | Not Available | - | 237768 - 238370 | 21783.3 |
| sensor histidine kinase | LC55x_RS00975 | Not Available | - | 238731 - 239825 | 39831.8 |
| flagellar biosynthetic protein flio | LC55x_RS00980 | Not Available | + | 239994 - 240455 | 15628.6 |
| fhipep family type iii secretion protein | LC55x_RS00985 | Not Available | + | 240876 - 242939 | 74289.7 |
| fha domain-containing protein | LC55x_RS00990 | Not Available | + | 243065 - 244528 | 50059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
