Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rdd family protein | LC55x_RS00845 | Not Available | + | 208905 - 209369 | 17510.5 |
| xvipcd domain-containing protein | LC55x_RS00850 | Not Available | - | 209483 - 210613 | 41736.5 |
| hypothetical protein | LC55x_RS26550 | Not Available | - | 210610 - 211179 | 20168.9 |
| meta and duf4377 domain-containing protein | LC55x_RS00855 | Not Available | - | 211288 - 212160 | 31241.0 |
| duf2750 domain-containing protein | LC55x_RS00860 | Not Available | - | 212296 - 212817 | 18913.9 |
| undecaprenyl-diphosphate phosphatase | LC55x_RS00865 | Not Available | - | 212855 - 213661 | 28284.9 |
| type i glutamate--ammonia ligase | LC55x_RS00870 | Not Available | + | 213945 - 215354 | 51854.6 |
| torf family putative porin | LC55x_RS00875 | Not Available | + | 216062 - 216901 | 29778.1 |
| p-ii family nitrogen regulator | LC55x_RS00880 | Not Available | + | 216954 - 217292 | 12203.9 |
| ammonium transporter | LC55x_RS00885 | Not Available | + | 217330 - 218700 | 46929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
