Lysobacter capsici strain 55

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter capsici strain 55 is a rod-shaped bacterium that thrives in chromium-contaminated environments, including both water sources and plant-associated habitats. This strain has been isolated from chromium-contaminated water and specifically from the water of plants, such as ready-to-eat lettuce, suggesting its potential association with agricultural systems impacted by chromium pollution. The presence of Lysobacter capsici strain 55 in such habitats indicates its possible role in the microbial community dynamics of contaminated ecosystems. The adaptability of this strain to chromium-laden environments may provide insights into bioremediation strategies, as it could contribute to the degradation or transformation of chromium compounds in affected areas. Understanding the mechanisms by which Lysobacter capsici strain 55 interacts with its chromium-rich habitat may also help elucidate its ecological role in mitigating the toxic effects of this heavy metal on plants and other microorganisms. Future research on this strain could further uncover its potential applications in bioremediation and the sustainable management of contaminated water sources in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter capsici
Strainstrain 55

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter capsici strain 55
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatchromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter capsici strain 55


Gene Summary

Adenine Count

1065478 bp

Thymine Count

1068386 bp

Guanine Count

2130390 bp

Cytosine Count

2127635 bp

Genome Length

6391889 bp

Protein-coding Genes

5219 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinLC55x_RS00690Not Available-166217 - 1664116920.94
phospholipase d family proteinLC55x_RS00695Not Available-167699 - 16967272850.6
ycei family proteinLC55x_RS00700Not Available-169685 - 17043127028.1
histidine phosphatase family proteinLC55x_RS00705Not Available-170422 - 17089816842.1
para family proteinLC55x_RS00710Not Available-171010 - 17163923182.9
hypothetical proteinLC55x_RS00715Not Available-172724 - 17392643401.4
aec family transporterLC55x_RS00720Not Available-174121 - 17502932318.0
aaa family atpaseLC55x_RS00725Not Available+175346 - 17683355285.3
gamma-glutamylcyclotransferase family proteinLC55x_RS00730Not Available-176868 - 17728115025.3
rimk family alpha-l-glutamate ligaseLC55x_RS00735Not Available-177336 - 17833736342.2

Displaying genes 181 – 190 of 5308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites