Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | LC55x_RS00640 | Not Available | - | 154426 - 155571 | 40026.8 |
| sis domain-containing protein | LC55x_RS00645 | Not Available | - | 155585 - 156595 | 34973.6 |
| gntr family transcriptional regulator | LC55x_RS00650 | Not Available | - | 156631 - 157383 | 27802.3 |
| glucose-6-phosphate dehydrogenase | LC55x_RS00655 | Not Available | + | 157532 - 159049 | 55483.4 |
| 6-phosphogluconolactonase | LC55x_RS00660 | Not Available | + | 159033 - 159788 | 27575.5 |
| phosphogluconate dehydratase | LC55x_RS00665 | Not Available | + | 160076 - 161908 | 64616.3 |
| had family phosphatase | LC55x_RS00670 | Not Available | + | 162264 - 162944 | 24875.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | LC55x_RS00675 | Not Available | + | 163315 - 163962 | 21559.2 |
| laci family dna-binding transcriptional regulator | LC55x_RS00680 | Not Available | - | 164410 - 165456 | 37914.9 |
| hotdog fold thioesterase | LC55x_RS00685 | Not Available | - | 165526 - 165981 | 15863.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
