Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | LC55x_RS00590 | Not Available | + | 141743 - 142258 | 19593.6 |
| anti-sigma factor | LC55x_RS00595 | Not Available | + | 142329 - 143096 | 27882.0 |
| hypothetical protein | LC55x_RS00600 | Not Available | + | 143129 - 143377 | 9063.57 |
| indolepyruvate ferredoxin oxidoreductase family protein | LC55x_RS00605 | Not Available | - | 143810 - 147499 | 134893.0 |
| hypothetical protein | LC55x_RS00610 | Not Available | + | 147805 - 148158 | 12780.0 |
| hypothetical protein | LC55x_RS00615 | Not Available | - | 148309 - 149739 | 47895.5 |
| macro domain-containing protein | LC55x_RS00620 | Not Available | + | 149942 - 150532 | 21297.6 |
| hypothetical protein | LC55x_RS00625 | Not Available | + | 150539 - 151387 | 30665.4 |
| hypothetical protein | LC55x_RS00630 | Not Available | + | 151384 - 151953 | 20782.7 |
| amidohydrolase family protein | LC55x_RS00635 | Not Available | + | 152115 - 153569 | 51680.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
