Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | LC55x_RS00540 | Not Available | + | 127721 - 129610 | 68594.5 |
| glucan biosynthesis protein | LC55x_RS00545 | Not Available | - | 129811 - 131403 | 59053.9 |
| nad(p)/fad-dependent oxidoreductase | LC55x_RS00550 | Not Available | + | 131715 - 133394 | 59866.7 |
| serine hydrolase | LC55x_RS00555 | Not Available | + | 133534 - 134958 | 50156.1 |
| m61 family metallopeptidase | LC55x_RS00560 | Not Available | + | 135166 - 137061 | 69927.8 |
| 3'-5' exonuclease | LC55x_RS00565 | Not Available | + | 137152 - 137739 | 21877.1 |
| putative quinol monooxygenase | LC55x_RS00570 | Not Available | + | 137938 - 138240 | 10794.1 |
| s41 family peptidase | LC55x_RS00575 | Not Available | + | 138305 - 139681 | 50960.9 |
| cytochrome b | LC55x_RS00580 | Not Available | - | 139856 - 140470 | 22363.1 |
| catalase family peroxidase | LC55x_RS00585 | Not Available | - | 140467 - 141576 | 39663.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
