Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mhyt domain-containing protein | LC55x_RS00495 | Not Available | - | 116477 - 117229 | 25684.4 |
| v4r domain-containing protein | LC55x_RS00500 | Not Available | - | 117373 - 118191 | 29345.3 |
| pyridoxal-phosphate dependent enzyme | LC55x_RS00505 | Not Available | - | 118417 - 119445 | 35781.8 |
| abc transporter permease | LC55x_RS00510 | Not Available | - | 120506 - 121756 | 45379.4 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS00515 | Not Available | - | 121753 - 123069 | 46530.7 |
| hlyd family secretion protein | LC55x_RS00520 | Not Available | - | 123087 - 124073 | 36245.9 |
| hlyd family secretion protein | LC55x_RS00525 | Not Available | - | 124070 - 125053 | 35058.8 |
| abc transporter atp-binding protein | LC55x_RS00530 | Not Available | - | 125076 - 125750 | 24245.0 |
| hypothetical protein | LC55x_RS28475 | Not Available | + | 126266 - 126394 | 4391.54 |
| hypothetical protein | LC55x_RS00535 | Not Available | + | 126478 - 127020 | 20110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
