Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | LC55x_RS00445 | Not Available | + | 98848 - 102453 | 131321.0 |
| exodeoxyribonuclease v subunit alpha | LC55x_RS00450 | Not Available | + | 102450 - 104297 | 65893.0 |
| type i restriction enzyme hsdr n-terminal domain-containing protein | LC55x_RS00455 | Not Available | + | 104476 - 105279 | 30119.5 |
| methyltransferase | LC55x_RS00460 | Not Available | - | 105633 - 106538 | 33841.7 |
| duf2798 domain-containing protein | LC55x_RS00465 | Not Available | + | 107106 - 107387 | 10081.8 |
| sdr family oxidoreductase | LC55x_RS00470 | Not Available | + | 107384 - 108358 | 34001.7 |
| efflux rnd transporter periplasmic adaptor subunit | LC55x_RS00475 | Not Available | + | 108355 - 109575 | 43387.7 |
| efflux rnd transporter permease subunit | LC55x_RS00480 | Not Available | + | 109839 - 113009 | 113562.0 |
| efflux transporter outer membrane subunit | LC55x_RS00485 | Not Available | + | 113002 - 114453 | 52475.6 |
| ketosteroid isomerase-related protein | LC55x_RS00490 | Not Available | - | 115363 - 115791 | 16003.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
