Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Lysobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Lysobacter |
| Species | Lysobacter capsici |
| Strain | strain 55 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chromium-contaminated water; Cr-contaminated plant water; leaf of ready-to-eat lettuce plant; water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1065478 bp
Thymine Count
1068386 bp
Guanine Count
2130390 bp
Cytosine Count
2127635 bp
Genome Length
6391889 bp
Protein-coding Genes
5219 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | LC55x_RS00245 | Not Available | + | 55091 - 56629 | 56318.8 |
| hypothetical protein | LC55x_RS00250 | Not Available | + | 56896 - 57480 | 21566.2 |
| nipsnap family protein | LC55x_RS27600 | Not Available | + | 57519 - 58763 | 46952.8 |
| yafy family protein | LC55x_RS00260 | Not Available | + | 58873 - 59571 | 26016.3 |
| rna polymerase sigma factor sigj | LC55x_RS00265 | Not Available | - | 59961 - 60848 | 32690.9 |
| carboxymuconolactone decarboxylase family protein | LC55x_RS00270 | Not Available | - | 61037 - 61480 | 16643.9 |
| response regulator transcription factor | LC55x_RS00275 | Not Available | - | 61619 - 62260 | 23368.4 |
| sensor histidine kinase | LC55x_RS00280 | Not Available | - | 62257 - 63387 | 40460.8 |
| hypothetical protein | LC55x_RS00285 | Not Available | + | 63549 - 64295 | 26572.9 |
| s9 family peptidase | LC55x_RS00290 | Not Available | + | 64446 - 65825 | 49964.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
