Escherichia coli strain C5

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain C5 is a Gram-negative, rod-shaped bacterium commonly found in host-associated environments. This strain exhibits a cell arrangement primarily characterized by singles and pairs, which is typical for many members of the Enterobacteriaceae family. E. coli strain C5 thrives optimally at a temperature of 37.0°C, aligning with the physiological temperature of warm-blooded hosts, suggesting an adaptation to a life in association with these organisms. As a facultative anaerobe, E. coli strain C5 has the ability to grow in both aerobic and anaerobic conditions, allowing it to exploit various niches within host environments. This metabolic versatility is crucial for its survival in diverse habitats, including the gastrointestinal tract, where it may play a role in nutrient cycling and maintaining gut homeostasis. The specific ecological role of E. coli strain C5 within its host ecosystem warrants further investigation. Understanding its interactions with the host and other microbial communities may provide insights into its potential contributions to host health or disease, as well as its adaptability to changing environmental conditions within the host. Such knowledge could have implications for microbiome studies and the development of probiotics or therapeutic interventions targeting dysbiosis.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain C5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain C5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain C5


Gene Summary

Adenine Count

56266 bp

Thymine Count

55759 bp

Guanine Count

47863 bp

Cytosine Count

54557 bp

Genome Length

214445 bp

Protein-coding Genes

239 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf6862 domain-containing proteinRG28_RS32940Not Available-97 - 100830537.2
duf6862 domain-containing proteinRG28_RS31540Not Available-1752 - 211212853.0
duf6862 domain-containing proteinRG28_RS28240Not Available-2347 - 25838772.47
is3 family transposaseRG28_RS28245Not Available-2758 - 397146346.2
tn3 family transposaseRG28_RS32585Not Available-4023 - 455619732.2
duf4158 domain-containing proteinRG28_RS32590Not Available-5161 - 630945105.6
recombinase family proteinRG28_RS28280Not Available+6466 - 704721507.2
duf6862 domain-containing proteinRG28_RS28285Not Available+7092 - 768522591.1
duf6862 domain-containing proteinRG28_RS28290Not Available+7763 - 927253512.7
duf6862 domain-containing proteinRG28_RS28295Not Available+9356 - 982017186.1

Displaying genes 1 – 10 of 353 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites