Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hafnia alvei FB1
Accession NumberNZ_CP009706.1
Gene Summary
Adenine Count
1202483 bp
Thymine Count
1201463 bp
Guanine Count
1150863 bp
Cytosine Count
1157912 bp
Genome Length
4712721 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
353 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | AT03_RS08715 | Not Available | + | 1901872 - 1902372 | 18482.1 |
| type vi secretion system contractile sheath large subunit | AT03_RS08720 | Not Available | + | 1902398 - 1903951 | 57841.6 |
| type vi secretion system baseplate subunit tssk | AT03_RS08725 | Not Available | + | 1903970 - 1905319 | 49797.1 |
| type vi secretion system protein tssl, short form | AT03_RS08730 | Not Available | + | 1905316 - 1905975 | 24999.2 |
| ompa family protein | AT03_RS08735 | Not Available | + | 1905988 - 1907697 | 62450.5 |
| hcp family type vi secretion system effector | AT03_RS08740 | Not Available | + | 1907785 - 1908276 | 18591.9 |
| type vi secretion system atpase tssh | AT03_RS08745 | Not Available | + | 1908484 - 1911219 | 100109.0 |
| type vi secretion system vgr family protein | AT03_RS08750 | Not Available | + | 1911213 - 1913744 | 93480.4 |
| duf3274 domain-containing protein | AT03_RS08755 | Not Available | + | 1913737 - 1915887 | 80594.1 |
| hypothetical protein | AT03_RS08760 | Not Available | + | 1915901 - 1916770 | 33274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.