Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Hafnia alvei FB1
Accession NumberNZ_CP009706.1
Gene Summary
Adenine Count
1202483 bp
Thymine Count
1201463 bp
Guanine Count
1150863 bp
Cytosine Count
1157912 bp
Genome Length
4712721 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
353 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | AT03_RS05110 | Not Available | - | 1099489 - 1099989 | 18117.8 |
| hcp family type vi secretion system effector | AT03_RS05115 | Not Available | + | 1100673 - 1101191 | 19253.8 |
| type vi secretion system tip protein vgrg | AT03_RS05120 | Not Available | + | 1101407 - 1103398 | 74141.9 |
| duf2169 domain-containing protein | AT03_RS22805 | Not Available | + | 1103409 - 1104200 | 29728.4 |
| duf2169 domain-containing protein | AT03_RS22810 | Not Available | + | 1104160 - 1104546 | 14734.7 |
| paar-like domain-containing protein | AT03_RS05130 | Not Available | + | 1104549 - 1108976 | 165652.0 |
| flia/whig family rna polymerase sigma factor | AT03_RS22625 | Not Available | - | 1109290 - 1109537 | 9626.72 |
| rhs repeat-associated core domain-containing protein | AT03_RS05145 | Not Available | + | 1109502 - 1111661 | 82148.4 |
| imm53 family immunity protein | AT03_RS05150 | Not Available | + | 1111662 - 1111940 | 10799.7 |
| flia/whig family rna polymerase sigma factor | AT03_RS22630 | Not Available | + | 1112435 - 1112526 | 3575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.