Hafnia alvei FB1

Gram-negativeFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei FB1 is a Gram-negative, facultative anaerobic bacterium characterized by its ability to thrive in both aerobic and anaerobic environments. This microbial species belongs to the Enterobacteriaceae family and is typically found in various environments, including soil and water, as well as in association with animal and plant matter. Its facultative anaerobic nature allows it to adapt to fluctuating oxygen levels, enabling survival and metabolic versatility in diverse ecological niches. Hafnia alvei has been studied for its potential roles in fermentation processes and its impact on food microbiology, contributing to the complex interactions within microbial communities. The bacterium may also play a role in biogeochemical cycles, participating in the degradation of organic matter under varying oxygen conditions. Understanding the ecological functions of Hafnia alvei FB1 can provide insights into its contributions to nutrient cycling and its interactions with other microorganisms in its environment. This adaptability not only underscores the ecological significance of Hafnia alvei but also highlights its potential applications in biotechnological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei FB1

Accession NumberNZ_CP009706.1

Gene Summary

Adenine Count

1202483 bp

Thymine Count

1201463 bp

Guanine Count

1150863 bp

Cytosine Count

1157912 bp

Genome Length

4712721 bp

Protein-coding Genes

4001 genes

Non-Coding Genes

353 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type vi secretion system contractile sheath small subunitAT03_RS05110Not Available-1099489 - 109998918117.8
hcp family type vi secretion system effectorAT03_RS05115Not Available+1100673 - 110119119253.8
type vi secretion system tip protein vgrgAT03_RS05120Not Available+1101407 - 110339874141.9
duf2169 domain-containing proteinAT03_RS22805Not Available+1103409 - 110420029728.4
duf2169 domain-containing proteinAT03_RS22810Not Available+1104160 - 110454614734.7
paar-like domain-containing proteinAT03_RS05130Not Available+1104549 - 1108976165652.0
flia/whig family rna polymerase sigma factorAT03_RS22625Not Available-1109290 - 11095379626.72
rhs repeat-associated core domain-containing proteinAT03_RS05145Not Available+1109502 - 111166182148.4
imm53 family immunity proteinAT03_RS05150Not Available+1111662 - 111194010799.7
flia/whig family rna polymerase sigma factorAT03_RS22630Not Available+1112435 - 11125263575.1

Displaying genes 1251 – 1260 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites