Bacillus mycoides strain ATCC 6462

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus mycoides strain ATCC 6462 is a Gram-positive, rod-shaped bacterium that demonstrates facultative anaerobic characteristics, allowing it to thrive in various oxygen conditions. This strain is notably isolated from the deep-sea habitat of the Iheya Ridge hydrothermal vent field in the Okinawa Trough, an environment characterized by extreme temperatures and unique chemical compositions. As a member of the Bacillus genus, B. mycoides strain ATCC 6462 exhibits resilience in challenging environments, which may contribute to its survival in the nutrient-limited and high-pressure conditions often found in deep-sea ecosystems. The facultative anaerobic nature of this bacterium suggests that it can utilize both aerobic and anaerobic metabolic pathways, potentially allowing it to exploit a diverse range of organic materials available in its ecological niche. The unique habitat of the Iheya Ridge hydrothermal vent field provides an intriguing context for studying the adaptations of B. mycoides strain ATCC 6462. The ability of this bacterium to inhabit such a geochemically distinct environment may offer insights into the metabolic versatility and ecological roles of microbial life in deep-sea hydrothermal systems. Further exploration of its physiological and biochemical properties could enhance our understanding of microbial ecology in extreme environments and their potential biotechnological applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus mycoides
Strainstrain ATCC 6462

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Bacillus mycoides strain ATCC 6462
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatdeep sea; Iheya Ridge hydrothermal vent field of Okinawa Trough
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Bacillus mycoides strain ATCC 6462


Gene Summary

Adenine Count

1698620 bp

Thymine Count

1691769 bp

Guanine Count

938636 bp

Cytosine Count

926843 bp

Genome Length

5255868 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+4707883 - 4707895Not Available
Hypothetical proteinBG05_RS25985Not Available-4711149 - 471146011049.5
TransposaseBG05_RS25990Not Available+4711699 - 471205814120.0
Putative is transposase (orfb)BG05_RS25995Not Available+4712062 - 47123019536.56
duf4028 family proteinBG05_RS26000Not Available-4712328 - 47125287966.58
general stress proteinBG05_RS26005Not Available-4712694 - 471322418315.9
hypothetical proteinBG05_RS31230Not Available-4713261 - 47134015454.79
hypothetical proteinBG05_RS26010Not Available+4713638 - 47138899415.59
Putative dna-binding response regulatorBG05_RS26015Not Available+4714096 - 4716786101569.0
cher family methyltransferaseBG05_RS26020Not Available+4716803 - 471766033468.2

Displaying genes 1 – 10 of 5502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

295 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 295 metabolites