Bifidobacterium catenulatum PV20-2

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium catenulatum PV20-2 is a Gram-positive, anaerobic bacterium belonging to the genus Bifidobacterium. This species is characterized by its anaerobic metabolism, indicating that it thrives in environments devoid of oxygen, which is typical for many members of the Bifidobacterium genus. As a representative of this group, B. catenulatum PV20-2 is likely involved in the fermentation of dietary fibers, contributing to the production of short-chain fatty acids (SCFAs) that play a crucial role in gut health and host metabolism. The anaerobic nature of B. catenulatum PV20-2 suggests its ecological niche within the human gut, where it may contribute to maintaining a balanced microbiota. Its Gram-positive cell wall structure may also provide insights into its resilience and interactions with the gut environment, potentially influencing its ability to adhere to intestinal surfaces and participate in microbial community dynamics. Understanding the traits of Bifidobacterium catenulatum PV20-2 can enhance our knowledge of its role in gut microbiota composition and function, underpinning its potential applications in probiotics and gut health management. Further research could elucidate its specific contributions to fermentation processes and interactions with other gut microorganisms, which are essential for maintaining gastrointestinal homeostasis.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium catenulatum
StrainPV20-2

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium catenulatum PV20-2


Gene Summary

Adenine Count

525359 bp

Thymine Count

514911 bp

Guanine Count

661934 bp

Cytosine Count

668774 bp

Genome Length

2370978 bp

Protein-coding Genes

1979 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinAH68_RS04960Not Available+1119245 - 111958313380.4
hypothetical proteinAH68_RS10560Not Available+1120148 - 112057315707.6
TerminaseAH68_RS04970Not Available+1120575 - 112245871135.3
Putative portal proteinAH68_RS04975Not Available+1122495 - 112412659510.8
Capsid maturation proteaseAH68_RS04980Not Available+1124126 - 112522641040.8
hypothetical proteinAH68_RS04985Not Available+1125248 - 112583221284.4
Capsid decoration proteinAH68_RS04990Not Available+1125865 - 112644920515.1
Capsid proteinAH68_RS04995Not Available+1126527 - 112759138864.7
chromosomal replication initiator protein dnaaAH68_RS00005Not Available+78 - 155355163.6
dna polymerase iii subunit betaAH68_RS00010Not Available+2116 - 324040854.4

Displaying genes 1 – 10 of 2062 in total

Metabolites

238 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001418D-alluloseC6H12O6Chemical structure of D-allulose551-68-8
Average180.1559Da
Monoisotopic180.0633881Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 238 metabolites