Borrelia parkeri SLO

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Borreliaceae

Genus

Borrelia

Description

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyBorreliaceae
GenusBorrelia
SpeciesBorrelia parkeri
StrainSLO

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Borrelia parkeri SLO
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Borrelia parkeri SLO

NZ_CP005851.2

Gene Summary

Adenine Count

323444 bp

Thymine Count

329067 bp

Guanine Count

132596 bp

Cytosine Count

132573 bp

Genome Length

917680 bp

Protein-coding Genes

835 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tigr00159 family proteinBPA_RS05580Not Available+1 - 34412688.2
glycoside hydrolase family 3 n-terminal domain-containing proteinBPA_RS00005Not Available-402 - 143938284.7
utp--glucose-1-phosphate uridylyltransferaseBPA_RS00010Not Available-1432 - 288655593.9
tigr00159 family proteinBPA_RS00015Not Available+3041 - 483565929.4
tryptophan--trna ligaseBPA_RS00020Not Available-4906 - 596140026.9
ai-2e family transporterBPA_RS00025Not Available-5964 - 703741227.4
had family hydrolaseBPA_RS00030Not Available-7134 - 799133292.2
diadenylate cyclase cdaaBPA_RS00035Not Available+8070 - 884028792.5
cdar family proteinBPA_RS00040Not Available+8844 - 983938288.6
holo-acp synthaseBPA_RS00045Not Available+9841 - 1021814417.9

Displaying genes 1 – 10 of 873 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

254 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 254 metabolites