Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | DSM 13497 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1356027 bp
Thymine Count
1364558 bp
Guanine Count
1121626 bp
Cytosine Count
1113028 bp
Genome Length
4955439 bp
Protein-coding Genes
3794 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transposase a | CALAB_RS03850 | Not Available | - | 996351 - 998201 | 71226.1 |
| phage regulatory cii family protein | CALAB_RS03855 | Not Available | - | 998546 - 999013 | 17793.6 |
| Hypothetical protein | CALAB_RS20880 | Not Available | - | 999079 - 999249 | 6366.01 |
| Hypothetical protein | CALAB_RS19725 | Not Available | + | 999351 - 999803 | 17168.1 |
| Is110 family transposase | CALAB_RS03865 | Not Available | - | 1000952 - 1002019 | 41547.9 |
| alpha/beta fold hydrolase | CALAB_RS03870 | Not Available | + | 1002621 - 1003970 | 51045.8 |
| Sugar fermentation stimulation protein | CALAB_RS03875 | Not Available | + | 1004092 - 1004793 | 26895.4 |
| Sumf1/egtb/pvdo family nonheme iron enzyme | CALAB_RS07405 | Not Available | - | 1873327 - 1874424 | 40089.1 |
| hypothetical protein | CALAB_RS07410 | Not Available | - | 1874424 - 1874669 | 8773.58 |
| hypothetical protein | CALAB_RS07415 | Not Available | - | 1874672 - 1875052 | 14503.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.