Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3604 domain-containing protein | ALPR1_RS00340 | Not Available | + | 78437 - 80293 | 70351.5 |
| peptidyl-prolyl cis-trans isomerase | ALPR1_RS00345 | Not Available | + | 80303 - 81154 | 32891.1 |
| hupe/urej family protein | ALPR1_RS00350 | Not Available | + | 81160 - 82146 | 36702.4 |
| tigr00366 family protein | ALPR1_RS00355 | Not Available | + | 82402 - 83790 | 51602.0 |
| voc family protein | ALPR1_RS00360 | Not Available | + | 84270 - 84641 | 14125.8 |
| endonuclease/exonuclease/phosphatase family protein | ALPR1_RS00365 | Not Available | + | 84758 - 85633 | 33439.7 |
| s8 family peptidase | ALPR1_RS00370 | Not Available | + | 85769 - 87400 | 59154.4 |
| ribose 5-phosphate isomerase b | ALPR1_RS00375 | Not Available | - | 87493 - 87930 | 15750.6 |
| twin-arginine translocase subunit tatc | ALPR1_RS00380 | Not Available | - | 88054 - 88917 | 32446.1 |
| serine hydroxymethyltransferase | ALPR1_RS00385 | Not Available | - | 88934 - 90202 | 46455.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
