Algoriphagus machipongonensis strain PR1

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus machipongonensis strain PR1 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions and exhibits optimal growth at a temperature of 29.0°C. As a non-spore-forming microbe, it relies on vegetative reproduction, which may influence its survival strategies in various environments. This strain's specific temperature preference indicates a potential adaptation to mesophilic habitats, suggesting that it may play a role in nutrient cycling within such ecosystems. The aerobic nature of Algoriphagus machipongonensis strain PR1 highlights its metabolic capabilities, likely involving oxygen-dependent processes that could contribute to its ecological interactions. While the exact ecological niche of this strain has not been detailed, the characteristics it possesses suggest potential involvement in the degradation of organic materials in oxygen-rich environments. Understanding the metabolic pathways and ecological roles of strains like PR1 can provide insights into the broader functions of microbial communities, particularly in decomposing organic matter and supporting nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus machipongonensis
Strainstrain PR1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus machipongonensis strain PR1


Gene Summary

Adenine Count

1459759 bp

Thymine Count

1474794 bp

Guanine Count

927619 bp

Cytosine Count

924552 bp

Genome Length

4787724 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf3604 domain-containing proteinALPR1_RS00340Not Available+78437 - 8029370351.5
peptidyl-prolyl cis-trans isomeraseALPR1_RS00345Not Available+80303 - 8115432891.1
hupe/urej family proteinALPR1_RS00350Not Available+81160 - 8214636702.4
tigr00366 family proteinALPR1_RS00355Not Available+82402 - 8379051602.0
voc family proteinALPR1_RS00360Not Available+84270 - 8464114125.8
endonuclease/exonuclease/phosphatase family proteinALPR1_RS00365Not Available+84758 - 8563333439.7
s8 family peptidaseALPR1_RS00370Not Available+85769 - 8740059154.4
ribose 5-phosphate isomerase bALPR1_RS00375Not Available-87493 - 8793015750.6
twin-arginine translocase subunit tatcALPR1_RS00380Not Available-88054 - 8891732446.1
serine hydroxymethyltransferaseALPR1_RS00385Not Available-88934 - 9020246455.7

Displaying genes 71 – 80 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites