Algoriphagus machipongonensis strain PR1

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus machipongonensis strain PR1 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions and exhibits optimal growth at a temperature of 29.0°C. As a non-spore-forming microbe, it relies on vegetative reproduction, which may influence its survival strategies in various environments. This strain's specific temperature preference indicates a potential adaptation to mesophilic habitats, suggesting that it may play a role in nutrient cycling within such ecosystems. The aerobic nature of Algoriphagus machipongonensis strain PR1 highlights its metabolic capabilities, likely involving oxygen-dependent processes that could contribute to its ecological interactions. While the exact ecological niche of this strain has not been detailed, the characteristics it possesses suggest potential involvement in the degradation of organic materials in oxygen-rich environments. Understanding the metabolic pathways and ecological roles of strains like PR1 can provide insights into the broader functions of microbial communities, particularly in decomposing organic matter and supporting nutrient cycling in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus machipongonensis
Strainstrain PR1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus machipongonensis strain PR1


Gene Summary

Adenine Count

1459759 bp

Thymine Count

1474794 bp

Guanine Count

927619 bp

Cytosine Count

924552 bp

Genome Length

4787724 bp

Protein-coding Genes

3982 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
amidohydrolaseALPR1_RS00195Not Available+42712 - 4383640883.6
nipsnap family proteinALPR1_RS00200Not Available-43865 - 4464429993.7
hypothetical proteinALPR1_RS00205Not Available-44823 - 4558428508.8
hypothetical proteinALPR1_RS00210Not Available+45892 - 4640120213.4
m1 family metallopeptidaseALPR1_RS00215Not Available-46579 - 4891589311.6
hupe/urej family proteinALPR1_RS00220Not Available-48930 - 4951121830.7
duf6702 family proteinALPR1_RS00225Not Available+49592 - 5008319302.8
cap domain-containing proteinALPR1_RS00230Not Available+50125 - 5083227601.0
ragb/susd family nutrient uptake outer membrane proteinALPR1_RS00235Not Available-51163 - 5268354986.9
susc/raga family tonb-linked outer membrane proteinALPR1_RS00240Not Available-52711 - 55788110637.0

Displaying genes 41 – 50 of 4033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites