Helicobacter canadensis MIT 98-5491

microaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter canadensis MIT 98-5491 is a Gram-negative, microaerophilic bacterium characterized by its requirement for reduced oxygen levels for optimal growth. This species belongs to the genus Helicobacter, which is known for its spiral-shaped morphology and motility, typically facilitated by flagella. The microaerophilic nature of H. canadensis MIT 98-5491 suggests that it thrives in environments where oxygen concentrations are lower than those found in the atmosphere, which may influence its ecological niches and interactions with other microorganisms. The Gram-negative cell wall structure of H. canadensis MIT 98-5491, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, may confer certain advantages in terms of resistance to environmental stresses and antimicrobial agents. The physiological and biochemical properties associated with microaerophiles, including the potential production of unique metabolic byproducts under low oxygen conditions, could play a role in its ecological interactions. Given its specific oxygen requirements, H. canadensis MIT 98-5491 may inhabit specialized environments, such as gastric mucosa or other gastrointestinal niches, where microaerophilic conditions prevail. This ecological adaptation may offer insights into the evolutionary strategies employed by Helicobacter species and their roles within complex microbial communities. Further research into its metabolic capabilities and ecological interactions would be valuable for understanding its biological significance in various environments.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter canadensis
StrainMIT 98-5491

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter canadensis MIT 98-5491
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter canadensis MIT 98-5491


Gene Summary

Adenine Count

534887 bp

Thymine Count

541095 bp

Guanine Count

288707 bp

Cytosine Count

258307 bp

Genome Length

1623845 bp

Protein-coding Genes

1574 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaHCAN_RS00005Not Available+1 - 129349650.7
dna polymerase iii subunit betaHCAN_RS00010Not Available+1459 - 252640728.1
dna topoisomerase (atp-hydrolyzing) subunit bHCAN_RS00015Not Available+2553 - 487187593.1
glycerol-3-phosphate 1-o-acyltransferase plsyHCAN_RS00020Not Available+4881 - 552823438.0
duf5666 domain-containing proteinHCAN_RS00025Not Available+5696 - 609714219.0
adenosylmethionine--8-amino-7-oxononanoate transaminaseHCAN_RS00030Not Available+6160 - 744648724.3
sodium/glutamate symporterHCAN_RS00035Not Available+7541 - 875243490.6
preq(1) synthaseHCAN_RS00040Not Available+8862 - 932918280.9
yran family proteinHCAN_RS00045Not Available-9326 - 968213615.6
homoserine dehydrogenaseHCAN_RS00050Not Available-9682 - 1095946181.5

Displaying genes 1 – 10 of 1626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

538 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 538 metabolites