Anabaena variabilis NIES-23

Gram-negativeFilamentousMotileAerobe

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Trichormus

Description

Anabaena variabilis NIES-23 is a Gram-negative, filamentous cyanobacterium characterized by its unique arrangement of cells in single filaments. This organism is heterotrophic, relying on organic compounds for its energy needs, which distinguishes it from many other cyanobacteria that primarily utilize photosynthesis. Anabaena variabilis NIES-23 is classified as an aerobe, indicating that it requires oxygen for its metabolic processes, further emphasizing its adaptability to various environments. The habitat of Anabaena variabilis NIES-23 is diverse, suggesting that it can thrive in multiple ecological niches. This adaptability may be linked to its filamentous structure, which can enhance nutrient acquisition and facilitate the colonization of different substrates. The ability to form single filaments may also play a role in its survival strategies, potentially allowing for efficient dispersal in aquatic environments where it is commonly found. Furthermore, the filamentous morphology of Anabaena variabilis NIES-23 could contribute to its ecological role in nutrient cycling within its habitats. By occupying a unique niche as a heterotroph, it may interact with other microbial communities, influencing the dynamics of organic matter decomposition and nutrient availability. This interaction highlights the importance of Anabaena variabilis NIES-23 in maintaining the balance of microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusTrichormus
SpeciesTrichormus variabilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Anabaena variabilis NIES-23

Accession NumberNZ_AP018216.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5261 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pfad family polyunsaturated fatty acid/polyketide biosynthesis proteinCA725_RS00170Not Available-50535 - 5211258141.0
pfab family proteinCA725_RS00175Not Available-52280 - 57085179773.0
sdr family nad(p)-dependent oxidoreductaseCA725_RS00180Not Available-57138 - 5889566023.8
hypothetical proteinCA725_RS00185Not Available-59159 - 5987526016.2
type i polyketide synthaseCA725_RS00190Not Available-59926 - 63723137909.0
amino acid adenylation domain-containing proteinCA725_RS00195Not Available-64333 - 67296112441.0
type i polyketide synthaseCA725_RS00200Not Available-67542 - 72305174868.0
type i polyketide synthaseCA725_RS00205Not Available-72320 - 77032170801.0
acyl carrier proteinCA725_RS00210Not Available-77357 - 776149831.77
helix-turn-helix domain-containing proteinCA725_RS00215Not Available-77752 - 7858531956.9

Displaying genes 41 – 50 of 5989 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

87 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da

Displaying 1–10 of 87 metabolites