Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728 is a Gram-positive, rod-shaped bacterium that typically exists as single cells. This strain is classified as an aerobe, indicating that it requires oxygen for growth, and it thrives optimally at a temperature of 32.0°C. As a chemoorganotroph, M. ulcerans subsp. shinshuense utilizes organic compounds as its energy source, which suggests a potential dependency on organic matter present in its habitat. The habitat of this strain is described as host-associated, which implies a close relationship with living hosts, potentially affecting its ecological niche and interactions within microbial communities. Understanding this association is crucial, as it may influence the strain's metabolic pathways and adaptation mechanisms necessary for survival and growth in host environments. In the context of its ecological role, Mycobacterium ulcerans subsp. shinshuense may contribute to the dynamics of microbial populations in host-associated environments, potentially influencing the health of the host and the overall microbial balance. Further research into the physiological and ecological implications of this strain could provide insights into its interactions with host organisms and its role in the microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium ulcerans
Strainsubsp. shinshuense strain ATCC 33728

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728


Gene Summary

Adenine Count

1011782 bp

Thymine Count

1015639 bp

Guanine Count

1934951 bp

Cytosine Count

1937309 bp

Genome Length

5899681 bp

Protein-coding Genes

5184 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
murein biosynthesis integral membrane protein murjSHTP_RS00055Not Available-12227 - 1296528110.8
cell wall synthesis protein cwsaSHTP_RS00060Not Available-13076 - 1350415235.3
peptidylprolyl isomeraseSHTP_RS00065Not Available+13669 - 1421719175.3
ph domain-containing proteinSHTP_RS00070Not Available-14228 - 1465315272.8
cell division protein crgaSHTP_RS00075Not Available-14809 - 1509010391.2
duf881 domain-containing proteinSHTP_RS00080Not Available+15219 - 1596226776.9
aminodeoxychorismate/anthranilate synthase component iiSHTP_RS00085Not Available+16000 - 1668624587.4
stk1 family pasta domain-containing ser/thr kinaseSHTP_RS00090Not Available-16664 - 1854466411.4
serine/threonine-protein kinaseSHTP_RS00095Not Available-18541 - 1989948138.7
d,d-transpeptidase pbpaSHTP_RS00100Not Available-19896 - 2137151307.9

Displaying genes 11 – 20 of 5236 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites