Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | GJW30_RS00230 | Not Available | + | 47123 - 47842 | 25401.7 |
| cog4223 family protein | GJW30_RS00240 | Not Available | + | 48041 - 49195 | 39752.4 |
| heme biosynthesis protein hemy | GJW30_RS00245 | Not Available | + | 49192 - 50790 | 57404.2 |
| Trna-thr | Not Available | Not Available | + | 50916 - 50991 | Not Available |
| hypothetical protein | GJW30_RS00255 | Not Available | + | 51152 - 52255 | 41247.1 |
| duf488 family protein | GJW30_RS00260 | Not Available | + | 52314 - 52904 | 21452.6 |
| helix-turn-helix domain-containing protein | GJW30_RS00270 | Not Available | + | 54423 - 54752 | 12724.2 |
| reverse transcriptase family protein | GJW30_RS00275 | Not Available | + | 54715 - 55737 | 37641.2 |
| type i restriction-modification system endonuclease | GJW30_RS00280 | Not Available | + | 56136 - 59510 | 126371.0 |
| n-6 dna methylase | GJW30_RS00285 | Not Available | + | 59510 - 61042 | 56124.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.