Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1,2-phenylacetyl-coa epoxidase subunit paad | GJW30_RS00030 | Not Available | - | 4195 - 4710 | 18616.4 |
| 1,2-phenylacetyl-coa epoxidase subunit paac | GJW30_RS00035 | Not Available | - | 4707 - 5456 | 27599.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | GJW30_RS00040 | Not Available | - | 5465 - 5752 | 10797.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | GJW30_RS00045 | Not Available | - | 5757 - 6764 | 37898.2 |
| phenylacetic acid degradation operon negative regulatory protein paax | GJW30_RS00050 | Not Available | - | 6840 - 7748 | 32547.7 |
| hypothetical protein | GJW30_RS00055 | Not Available | + | 7871 - 8092 | 7284.15 |
| bug family tripartite tricarboxylate transporter substrate binding protein | GJW30_RS00060 | Not Available | - | 8150 - 9109 | 34043.1 |
| thiamine pyrophosphate-binding protein | GJW30_RS00065 | Not Available | + | 9293 - 10969 | 60032.0 |
| antibiotic biosynthesis monooxygenase family protein | GJW30_RS00070 | Not Available | - | 11172 - 11498 | 12381.5 |
| hemin uptake protein hemp | GJW30_RS00075 | Not Available | + | 11672 - 11866 | 6976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.